Download MendeleyCrystal structure of protein of unknown function (NP_342590.1) from Sulfolobus solfataricus at 2.09 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
2QS7 | pdb_00002qs7
CRYSTAL STRUCTURE OF a putative oxidoreductase of the DsrE/DsrF-like family (SSO1126) FROM SULFOLOBUS SOLFATARICUS P2 AT 2.09 A RESOLUTION
- PDB DOI: https://doi.org/10.2210/pdb2QS7/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Saccharolobus solfataricus P2
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-07-30 Released: 2007-08-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.09 Å
- R-Value Free: 0.203 (Depositor), 0.210 (DCC)
- R-Value Work: 0.176 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.177 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uncharacterized protein | 144 | Saccharolobus solfataricus P2 | Mutation(s): 0 Gene Names: NP_342590.1, SSO1126 |  | |
UniProt | |||||
Find proteins for Q97Z17 (Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)) Explore Q97Z17 Go to UniProtKB: Q97Z17 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q97Z17 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EPE Query on EPE | F [auth A], I [auth D] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N |  | ||
| CL Query on CL | E [auth A], G [auth D], H [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.09 Å
- R-Value Free: 0.203 (Depositor), 0.210 (DCC)
- R-Value Work: 0.176 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.177 (Depositor)
Diffraction Data: https://doi.org/10.18430/M32QS7
Space Group: H 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 112.36 | α = 90 |
| b = 112.36 | β = 90 |
| c = 293.284 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PHENIX | refinement |
| SHELX | phasing |
| MolProbity | model building |
| XSCALE | data scaling |
| PDB_EXTRACT | data extraction |
| MAR345 | data collection |
| XDS | data reduction |
| SHELXD | phasing |
| autoSHARP | phasing |
Entry History
Deposition Data
- Released Date: 2007-08-21 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History (Full details and data files)
- Version 1.0: 2007-08-21
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Version format compliance - Version 1.2: 2017-10-25
Changes: Author supporting evidence, Refinement description - Version 1.3: 2019-07-24
Changes: Data collection, Derived calculations, Refinement description - Version 1.4: 2023-01-25
Changes: Database references, Derived calculations - Version 1.5: 2024-10-30
Changes: Data collection, Refinement description, Structure summary
