Human putative methyltransferase MGC2408

Experimental Data Snapshot

  • Resolution: 1.30 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.210 

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Ligand Structure Quality Assessment 

This is version 1.4 of the entry. See complete history


An intact SAM-dependent methyltransferase fold is encoded by the human endothelin-converting enzyme-2 gene.

Tempel, W.Wu, H.Dombrovsky, L.Zeng, H.Loppnau, P.Zhu, H.Plotnikov, A.N.Bochkarev, A.

(2009) Proteins 74: 789-793

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Uncharacterized protein MGC2408215Homo sapiensMutation(s): 1 
Gene Names: MGC2408EEF1AKMT4
EC: 2.1.1
Find proteins for P0DPD7 (Homo sapiens)
Explore P0DPD7 
Go to UniProtKB:  P0DPD7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0DPD7
Sequence Annotations
  • Reference Sequence
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 35.883α = 90
b = 45.56β = 105.87
c = 55.102γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
ADSCdata collection

Structure Validation

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Ligand Structure Quality Assessment 

Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2007-05-22
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-10-18
    Changes: Refinement description
  • Version 1.4: 2021-10-20
    Changes: Database references, Derived calculations