2PWJ

Structure of a mitochondrial type II peroxiredoxin from Pisum sativum


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.292 
  • R-Value Work: 0.277 
  • R-Value Observed: 0.298 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structure of a mitochondrial type II peroxiredoxin from Pisum sativum

Lopez-Jaramillo, F.J.Barranco-Medina, S.Lazaro, J.J.Santoyo-Gonzalez, F.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial peroxiredoxin
A, B, C, D, E
A, B, C, D, E, F
171Pisum sativumMutation(s): 0 
Gene Names: prx
EC: 1.11.1.15 (PDB Primary Data), 1.11.1.25 (UniProt)
UniProt
Find proteins for Q6KBB1 (Pisum sativum)
Explore Q6KBB1 
Go to UniProtKB:  Q6KBB1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6KBB1
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.292 
  • R-Value Work: 0.277 
  • R-Value Observed: 0.298 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 61.88α = 102.94
b = 66.4β = 104.44
c = 77.23γ = 99.07
Software Package:
Software NamePurpose
SAINTdata scaling
AMoREphasing
CNSrefinement
PDB_EXTRACTdata extraction
PROTEUM PLUSdata collection
SAINTdata reduction
XPREPdata reduction

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2008-05-27
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2024-02-21
    Changes: Data collection, Database references