2PW9

Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.5 of the entry. See complete history

Literature

Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila.

Bonanno, J.B.Dickey, M.Bain, K.T.Logan, C.Romero, R.Smith, D.Wasserman, S.Sauder, J.M.Burley, S.K.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative formate dehydrogenase accessory protein
A, B, C, D
268Desulfotalea psychrophila (strain LSv54 / DSM 12343)Mutation(s): 0 
Gene Names: fdhD
Find proteins for Q6AMB9 (Desulfotalea psychrophila (strain LSv54 / DSM 12343))
Go to UniProtKB:  Q6AMB9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, C
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.196 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 61.987α = 90.00
b = 99.257β = 109.70
c = 88.502γ = 90.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
SHELXEmodel building
SCALAdata scaling
REFMACrefinement
MAR345data collection
SHELXCDphasing
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-05-22
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2012-10-24
    Type: Structure summary
  • Version 1.4: 2017-10-18
    Type: Refinement description
  • Version 1.5: 2018-11-14
    Type: Data collection, Structure summary