Download MendeleyCrystal structure of the ATP-binding sugar transporter-like protein from Salmonella typhimurium.
Kim, Y., Li, H., Holzle, D., Joachimiak, A.To be published.
2PP6
Crystal structure of the ATP-binding sugar transporter-like protein from Salmonella typhimurium
- PDB DOI: 10.2210/pdb2PP6/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2007-04-28 Released: 2007-05-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.279
- R-Value Work: 0.210
- R-Value Observed: 0.216
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Gifsy-2 prophage ATP-binding sugar transporter-like protein | A | 102 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Mutation(s): 4 Gene Names: STM1035 |  |
UniProt | |||||
Find proteins for Q8ZQ92 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)) Explore Q8ZQ92 Go to UniProtKB: Q8ZQ92 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8ZQ92 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.279
- R-Value Work: 0.210
- R-Value Observed: 0.216
- Space Group: P 4 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 51.82 | α = 90 |
| b = 51.82 | β = 90 |
| c = 69.329 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SBC-Collect | data collection |
| HKL-2000 | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| HKL-3000 | phasing |
| SHELXCD | phasing |
| SHELXD | phasing |
| SHELXE | model building |
| MLPHARE | phasing |
| SOLVE | phasing |
| RESOLVE | phasing |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2007-05-29 Deposition Author(s): Kim, Y., Li, H., Holzle, D., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2007-05-29
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Derived calculations, Version format compliance - Version 1.3: 2017-10-18
Changes: Refinement description
