2OXC

Human DEAD-box RNA helicase DDX20, DEAD domain in complex with ADP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.175 
  • R-Value Work: 0.153 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Probable ATP-dependent RNA helicase DDX20
A, B
230Homo sapiensMutation(s): 0 
Gene Names: DDX20 (DP103, GEMIN3)
EC: 3.6.4.13
Find proteins for Q9UHI6 (Homo sapiens)
Go to Gene View: DDX20
Go to UniProtKB:  Q9UHI6
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ADP
Query on ADP

Download SDF File 
Download CCD File 
A, B
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.175 
  • R-Value Work: 0.153 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 63.800α = 90.00
b = 63.800β = 90.00
c = 214.300γ = 120.00
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
MOLREPphasing
MAR345data collection
XDSdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2007-02-27
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2017-10-18
    Type: Refinement description
  • Version 1.4: 2018-01-24
    Type: Structure summary