2OPW

Crystal structure of human phytanoyl-CoA dioxygenase PHYHD1 (apo)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.221 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal structure of human phytanoyl-CoA dioxygenase PHYHD1 (apo)

Zhang, Z.Butler, D.McDonough, M.A.Kavanagh, K.L.Bray, J.E.Ng, S.S.von Delft, F.Arrowsmith, C.H.Weigelt, J.Edwards, A.Sundstrom, M.Schofield, C.J.Oppermann, U.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
PHYHD1 proteinA291Homo sapiensMutation(s): 0 
Gene Names: PHYHD1
EC: 1.14.11 (PDB Primary Data), 1 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for Q5SRE7 (Homo sapiens)
Explore Q5SRE7 
Go to UniProtKB:  Q5SRE7
PHAROS:  Q5SRE7
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.221 
  • Space Group: P 31 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 91.97α = 90
b = 91.97β = 90
c = 81.61γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
MAR345data collection
XDSdata reduction
XDSdata scaling
PHASERphasing

Structure Validation

View Full Validation Report




Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2007-03-06
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Advisory, Version format compliance
  • Version 1.3: 2017-10-18
    Changes: Refinement description
  • Version 1.4: 2018-06-27
    Changes: Data collection, Derived calculations