2OJU

X-ray structure of complex of human cyclophilin J with cyclosporin A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.193 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Targeting Cyclophilin J, a Novel Peptidyl-Prolyl Isomerase, Can Induce Cellular G1/S Arrest and Repress the Growth of Hepatocellular Carcinoma

Chen, J.Chen, S.Huang, L.Zhao, X.Tan, J.Huang, C.Saiyin, H.Zhang, M.Zeng, X.Xi, J.Wan, B.Zhao, Y.Xia, Z.Jiang, H.Yi, Q.Liu, J.O.Yu, L.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3
A, B
167Homo sapiensGene Names: PPIL3
EC: 5.2.1.8
Find proteins for Q9H2H8 (Homo sapiens)
Go to Gene View: PPIL3
Go to UniProtKB:  Q9H2H8
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
CYCLOSPORIN A
C, D
11N/AN/A
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Biologically Interesting Molecules 1 Unique
IDChainsNameType/Class2D Diagram3D Interactions
PRD_000142
Query on PRD_000142
C,DCyclosporin ACyclic peptide / Immunosuppressant

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.193 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 64.387α = 90.00
b = 64.387β = 90.00
c = 200.943γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data scaling
CNSrefinement
AMoREphasing
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2007-01-14 
  • Released Date: 2008-01-22 
  • Deposition Author(s): Xia, Z., Huang, L.

Revision History 

  • Version 1.0: 2008-01-22
    Type: Initial release
  • Version 1.1: 2011-06-14
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2011-07-27
    Type: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary
  • Version 1.4: 2012-12-12
    Type: Other