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Download EndnoteCrystal Structure of mandelate racemase/muconate lactonizing enzyme from Polaromonas sp. JS666
Kumaran, D., Sridhar, V., Burley, S.K., Swaminathan, S.To be published.
2OG9
Crystal Structure of mandelate racemase/muconate lactonizing enzyme from Polaromonas sp. JS666
- DOI: 10.2210/pdb2OG9/pdb
- Classification: ISOMERASE
- Organism(s): Polaromonas sp. (strain JS666 / ATCC BAA-500)
- Expression System: Escherichia coli
- Deposited: 2007-01-05 Released: 2007-02-27
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.9 Å
- R-Value Free: 0.230
- R-Value Work: 0.203
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Mandelate racemase/muconate lactonizing enzyme | A, B | 393 | Polaromonas sp. (strain JS666 / ATCC BAA-500) | Mutation(s): 0 EC: 4.2.1.-, 4.2.1.42 |
Find proteins for Q12GE3 (Polaromonas sp. (strain JS666 / ATCC BAA-500)) Go to UniProtKB: Q12GE3 | ||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CA Query on CA | A, B | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.9 Å
- R-Value Free: 0.230
- R-Value Work: 0.203
- Space Group: I 4
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 133.416 | α = 90.00 |
| b = 133.416 | β = 90.00 |
| c = 87.434 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| MOSFLM | data reduction |
| ARP/wARP | model building |
| SHELXD | phasing |
| SHARP | phasing |
| CNS | refinement |
| CCP4 | data scaling |
Entry History
Deposition Data
- Deposited Date: 2007-01-05
- Released Date: 2007-02-27
- Deposition Author(s): Kumaran, D., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History
- Version 1.0: 2007-02-27
Type: Initial release - Version 1.1: 2008-04-24
Type: Version format compliance - Version 1.2: 2011-07-13
Type: Derived calculations, Source and taxonomy, Version format compliance
