2NSB

Structures of and interactions between domains of trigger factor from Themotoga maritima


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.256 

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This is version 1.2 of the entry. See complete history

Literature

Structures of and interactions between domains of trigger factor from Thermotoga maritima.

Martinez-Hackert, E.Hendrickson, W.A.

(2007) Acta Crystallogr.,Sect.D 63: 536-547

  • DOI: 10.1107/S090744490700964X
  • Primary Citation of Related Structures:  2NSA, 2NSC

  • PubMed Abstract: 
  • Trigger factor (TF) is a eubacterial chaperone that associates with ribosomes at the peptide-exit tunnel and also occurs in excess free in the cytosol. TF is a three-domain protein that appears to exist in a dynamic equilibrium of oligomerization sta ...

    Trigger factor (TF) is a eubacterial chaperone that associates with ribosomes at the peptide-exit tunnel and also occurs in excess free in the cytosol. TF is a three-domain protein that appears to exist in a dynamic equilibrium of oligomerization states and interdomain conformations. X-ray crystallography and chemical cross-linking were used to study the roles of the N- and C-terminal domains of Thermotoga maritima TF in TF oligomerization and chaperone activity. The structural conservation of both the N- and C-terminal TF domains was unambiguously established. The biochemical and crystallographic data reveal a tendency for these domains to partake in diverse and apparently nonspecific protein-protein interactions. It is found that the T. maritima and Escherichia coli TF surfaces lack evident exposed hydrophobic patches. Taken together, these data suggest that TF chaperones could interact with nascent proteins via hydrophilic surfaces.


    Organizational Affiliation

    Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Trigger factor
A
109Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)Gene Names: tig
EC: 5.2.1.8
Find proteins for Q9WZF8 (Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099))
Go to UniProtKB:  Q9WZF8
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.256 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 48.092α = 90.00
b = 86.553β = 90.00
c = 32.954γ = 90.00
Software Package:
Software NamePurpose
SOLVEphasing
REFMACrefinement
PDB_EXTRACTdata extraction
RESOLVEphasing
CCP4data scaling
ADSCdata collection
DENZOdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-03-27
    Type: Initial release
  • Version 1.1: 2008-04-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Version format compliance