2N5Z

Mycobacterium tuberculosis: a dynamic view of the resuscitation promoting factor RpfC catalytic domain


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

NMR Structure and Dynamics of the Resuscitation Promoting Factor RpfC Catalytic Domain.

Maione, V.Ruggiero, A.Russo, L.De Simone, A.Pedone, P.V.Malgieri, G.Berisio, R.Isernia, C.

(2015) PLoS One 10: e0142807-e0142807

  • DOI: https://doi.org/10.1371/journal.pone.0142807
  • Primary Citation of Related Structures:  
    2N5Z

  • PubMed Abstract: 

    Mycobacterium tuberculosis latent infection is maintained for years with no clinical symptoms and no adverse effects for the host. The mechanism through which dormant M. tuberculosis resuscitates and enters the cell cycle leading to tuberculosis is attracting much interest. The RPF family of proteins has been found to be responsible for bacteria resuscitation and normal proliferation. This family of proteins in M. tuberculosis is composed by five homologues (named RpfA-E) and understanding their conformational, structural and functional peculiarities is crucial to the design of therapeutic strategies.Therefore, we report the structural and dynamics characterization of the catalytic domain of RpfC from M. tubercolosis by combining Nuclear Magnetic Resonance, Circular Dichroism and Molecular Dynamics data. We also show how the formation of a disulfide bridge, highly conserved among the homologues, is likely to modulate the shape of the RpfC hydrophobic catalytic cleft. This might result in a protein function regulation via a "conformational editing" through a disulfide bond formation.


  • Organizational Affiliation

    Dipartimento di Scienze e Tecnologie Ambientali Biologiche e Farmaceutiche, Second University of Naples, via Vivaldi 43, 81100, Caserta, Italy.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Resuscitation-promoting factor RpfC82Mycobacterium tuberculosis H37RvMutation(s): 0 
Gene Names: MTCY180.34rpfCRv1884c
EC: 3
UniProt
Find proteins for O07747 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Explore O07747 
Go to UniProtKB:  O07747
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO07747
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2015-11-25
    Type: Initial release
  • Version 1.1: 2015-12-16
    Changes: Database references
  • Version 1.2: 2023-06-14
    Changes: Data collection, Database references, Other