Biological Assembly 1  

 3D View: Structure | 1D-3D View | Validation Report | Predict Membrane 

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 5.98 kDa 
• Atom Count: 416 
• Modelled Residue Count: 54 
• Deposited Residue Count: 54 
• Unique protein chains: 1

2N5S

Spatial structure of EGFR transmembrane and juxtamembrane domains in DPC micelles

• PDB DOI: 10.2210/pdb2N5S/pdb
• BMRB: 25729

• Classification: TRANSFERASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 
• Membrane Protein: Yes  PDBTMMemProtMD


• Deposited: 2015-07-27 Released: 2015-10-14 
• Deposition Author(s): Mineev, K., Bocharov, E., Bocharova, O., Arseniev, A.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 10 
• Selection Criteria: structures with the least restraint violations 

Literature

The Membrane Mimetic Affects the Spatial Structure and Mobility of EGFR Transmembrane and Juxtamembrane Domains.

Mineev, K.S., Panova, S.V., Bocharova, O.V., Bocharov, E.V., Arseniev, A.S.

(2015) Biochemistry 54: 6295-6298

• PubMed: 26440883 
• DOI: 10.1021/acs.biochem.5b00851
• Primary Citation of Related Structures:  
  2N5S


• PubMed Abstract: 
  

The epidermal growth factor receptor (EGFR) is one of the most extensively studied receptor tyrosine kinases, as it is involved in a wide range of cellular processes and severe diseases. Recent works reveal that the single-helix transmembrane domains and cytoplasmic juxtamembrane regions play an important role in the receptor activation process. Here we present the results of our investigation of the spatial structure and mobility of the EGFR transmembrane domain and juxtamembrane regions in various membranelike environments, which shed light on the effects of the membrane physical properties and composition on the behavior of the juxtamembrane domain.

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Organizational Affiliation: 

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences RAS , str. Miklukho-Maklaya 16/10, Moscow, 117997 Russian Federation.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Epidermal growth factor receptor	A	54	Homo sapiens	Mutation(s): 0  Gene Names: EGFR, ERBB, ERBB1, HER1 EC: 2.7.10.1 Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for P00533 (Homo sapiens) Explore P00533  Go to UniProtKB:  P00533
PHAROS:  P00533

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 10 
• Selection Criteria: structures with the least restraint violations 
• OLDERADO: 2N5S Olderado

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2015-07-27 
• Released Date: 2015-10-14 
Deposition Author(s): Mineev, K., Bocharov, E., Bocharova, O., Arseniev, A.

Revision History  

• Version 1.0: 2015-10-14
  Type: Initial release
  
• Version 1.1: 2015-11-11
  Changes: Database references