2MXV | pdb_00002mxv

NMR structure of the first Zinc Finger domain of RBM10

PDB DOI: https://doi.org/10.2210/pdb2MXV/pdb
BMRB: 25433

Classification: RNA BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2015-01-16 Released: 2015-01-28
Deposition Author(s): Serrano, P., Wuthrich, K., Geralt, M., Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 80
Conformers Submitted: 20
Selection Criteria: target function

wwPDB Validation 3D Report Full Report

Validation slider image for 2MXV

This is version 1.2 of the entry. See complete history.

Literature

NMR structure of the first Zinc Finger domain of RBM10

Serrano, P., Geralt, M., Wuthrich, K.

To be published.

Macromolecule Content

Total Structure Weight: 5.02 kDa
Atom Count: 345
Modeled Residue Count: 43
Deposited Residue Count: 43
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
RNA-binding protein 10	A	43	Homo sapiens	Mutation(s): 0 Gene Names: RBM10, DXS8237E, GPATC9, GPATCH9, KIAA0122
UniProt & NIH Common Fund Data Resources
Find proteins for P98175 (Homo sapiens) Explore P98175 Go to UniProtKB: P98175
PHAROS: P98175 GTEx: ENSG00000182872
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P98175
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 80
Conformers Submitted: 20
Selection Criteria: target function

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2015-01-28

Deposition Author(s):

Joint Center for Structural Genomics (JCSG)

Partnership for T-Cell Biology (TCELL)

Revision History (Full details and data files)

Version 1.0: 2015-01-28
Type: Initial release
Version 1.1: 2023-06-14
Changes: Data collection, Database references, Derived calculations, Other
Version 1.2: 2024-05-15
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.