2KO6 | pdb_00002ko6

Solution structure of protein sf3929 from Shigella flexneri 2a. Northeast Structural Genomics Consortium target SfR81/Ontario Center for Structural Proteomics Target sf3929

PDB DOI: https://doi.org/10.2210/pdb2KO6/pdb
BMRB: 16490

Classification: Structural Genomics, Unknown function
Organism(s): Shigella flexneri
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2009-09-10 Released: 2009-09-22
Deposition Author(s): Wu, B., Yee, A., Fares, C., Lemak, A., Semest, A., Arrowsmith, C.H., Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2KO6

This is version 1.4 of the entry. See complete history.

Literature

Solution Structure of protein sf3929 from Shigella flexneri 2a. Northeast Structural Genomics Consortium target SfR81/Ontario Center for Structural Proteomics Target sf3929

Wu, B., Yee, A., Fares, C., Lemak, A., Semest, A., Arrowsmith, C.H.

To be published.

Macromolecule Content

Total Structure Weight: 10.32 kDa
Atom Count: 725
Modeled Residue Count: 89
Deposited Residue Count: 89
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein yihD	A	89	Shigella flexneri	Mutation(s): 0 Gene Names: yihD, S3818, SF3929
UniProt
Find proteins for A0A384LJ77 (Shigella flexneri) Explore A0A384LJ77 Go to UniProtKB: A0A384LJ77
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A384LJ77
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2009-09-22

Deposition Author(s):

Arrowsmith, C.H.

Northeast Structural Genomics Consortium (NESG)

Ontario Centre for Structural Proteomics (OCSP)

Revision History (Full details and data files)

Version 1.0: 2009-09-22
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2012-01-18
Changes: Database references
Version 1.3: 2020-02-26
Changes: Data collection, Database references, Other
Version 1.4: 2024-05-01
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.