2IW2

Crystal structure of human Prolidase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.82 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.157 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of Human Prolidase: The Molecular Basis of Pd Disease

Mueller, U.Niesen, F.H.Roske, Y.Goetz, F.Behlke, J.Buessow, K.Heinemann, U.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
XAA-PRO DIPEPTIDASE
A, B
494Homo sapiensGene Names: PEPD (PRD)
EC: 3.4.13.9
Find proteins for P12955 (Homo sapiens)
Go to Gene View: PEPD
Go to UniProtKB:  P12955
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A, B
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.82 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.157 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 103.579α = 90.00
b = 108.518β = 90.00
c = 211.024γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
SOLVE/RESOLVEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-07-05
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance