Download MendeleyCrystal structure of a 59 kDa fragment of topoisomerase IV subunit A (GrlA) from Staphylococcus aureus
Carr, S.B., Makris, G., Thomas, C.D., Phillips, S.E.V.To be published.
2INR
Crystal structure of a 59 kDa fragment of topoisomerase IV subunit A (GrlA) from Staphylococcus aureus
- PDB DOI: https://doi.org/10.2210/pdb2INR/pdb
- Classification: ISOMERASE
- Organism(s): Staphylococcus aureus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2006-10-09 Released: 2007-09-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.283
- R-Value Work: 0.234
- R-Value Observed: 0.237
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| DNA topoisomerase 4 subunit A | 514 | Staphylococcus aureus | Mutation(s): 0 Gene Names: parC EC: 5.99.1 (PDB Primary Data), 5.6.2.2 (UniProt) |  | |
UniProt | |||||
Find proteins for Q6G9K4 (Staphylococcus aureus (strain MSSA476)) Explore Q6G9K4 Go to UniProtKB: Q6G9K4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6G9K4 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | B [auth A], C [auth A], D [auth A], E [auth A], F [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.283
- R-Value Work: 0.234
- R-Value Observed: 0.237
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 41.458 | α = 90 |
| b = 171.885 | β = 90 |
| c = 87.892 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2007-09-18 Deposition Author(s): Carr, S.B.
Revision History (Full details and data files)
- Version 1.0: 2007-09-18
Type: Initial release - Version 1.1: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.2: 2023-08-30
Changes: Data collection, Database references, Refinement description
