2IJ9

Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.90 Å
  • R-Value Free: 0.330 
  • R-Value Work: 0.283 
  • R-Value Observed: 0.284 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus

Patskovsky, Y.Chen, R.Keefe, L.J.Sauder, J.M.Dickey, M.Adams, J.M.Ozyurt, S.Wasserman, S.R.Burley, S.K.Almo, S.C.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Uridylate kinaseA, B219Archaeoglobus fulgidus DSM 4304Mutation(s): 1 
Gene Names: pyrHAF_2042
EC: 2.7.4 (PDB Primary Data), 2.7.4.22 (UniProt)
Find proteins for O28237 (Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
Explore O28237 
Go to UniProtKB:  O28237
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.90 Å
  • R-Value Free: 0.330 
  • R-Value Work: 0.283 
  • R-Value Observed: 0.284 
  • Space Group: P 43 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 94.277α = 90
b = 94.277β = 90
c = 186.672γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
HKL-2000data scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History 

  • Version 1.0: 2006-10-17
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Source and taxonomy, Version format compliance
  • Version 1.3: 2018-11-14
    Changes: Data collection, Structure summary