2H7H | pdb_00002h7h

Crystal structure of the JUN BZIP homodimer complexed with AP-1 DNA

• PDB DOI: https://doi.org/10.2210/pdb2H7H/pdb
• NAKB: 2H7H

• Classification: VIRAL PROTEIN/DNA
• Organism(s): Avian sarcoma virus
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2006-06-02 Released: 2007-06-12 
• Deposition Author(s): Rajan, S.S., Borovilos, M., Cuff, M.E., Kim, Y.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Free: 
  0.274 (Depositor), 0.280 (DCC) 
• R-Value Work: 
  0.218 (Depositor), 0.220 (DCC) 
• R-Value Observed: 
  0.224 (Depositor) 

Literature

Crystal structure of the JUN BZIP homodimer complexed with AP-1 DNA

Kim, Y., Borovilos, M.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 26.29 kDa 
• Atom Count: 1,812 
• Modeled Residue Count: 154 
• Deposited Residue Count: 162 
• Unique protein chains: 1
• Unique nucleic acid chains: 2

Macromolecules

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Viral jun transforming protein	C [auth A], D [auth B]	62	Avian sarcoma virus	Mutation(s): 0
UniProt
Find proteins for P05411 (Avian sarcoma virus (strain 17)) Explore P05411  Go to UniProtKB:  P05411

Entity ID: 1
Molecule	Chains	Length	Organism	Image
5'-D(*CP*GP*TP*CP*GP*AP*TP*GP*AP*CP*TP*CP*AP*TP*CP*GP*AP*CP*G)-3'	A [auth X]	19	N/A

Entity ID: 2
Molecule	Chains	Length	Organism	Image
5'-D(*CP*GP*TP*CP*GP*AP*TP*GP*AP*GP*TP*CP*AP*TP*CP*GP*AP*CP*G)-3'	B [auth Y]	19	N/A

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Free:  0.274 (Depositor), 0.280 (DCC) 
• R-Value Work:  0.218 (Depositor), 0.220 (DCC) 
• R-Value Observed: 0.224 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 42.258	α = 90
b = 74.203	β = 111.25
c = 58.303	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
ADSC	data collection
HKL-2000	data scaling
CNS	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-06-12 
Deposition Author(s): Rajan, S.S., Borovilos, M., Cuff, M.E., Kim, Y.

Revision History  

• Version 1.0: 2007-06-12
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Advisory, Version format compliance
• Version 1.3: 2024-02-14
  Changes: Data collection, Database references, Refinement description