Download MendeleyStructure of the complex of monomeric sarcosine with its substrate analogue inhibitor 2-furoic acid at 1.3 A resolution.
Chen, Z., Trickey, P., Jorns, M.S., Mathews, F.S.To be published.
2GF3
Structure of the complex of monomeric sarcosine with its substrate analogue inhibitor 2-furoic acid at 1.3 A resolution.
- PDB DOI: 10.2210/pdb2GF3/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Bacillus sp. (in: Bacteria)
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2006-03-21 Released: 2007-02-06
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.30 Å
- R-Value Free: 0.195
- R-Value Work: 0.170
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Monomeric sarcosine oxidase | A, B | 389 | Bacillus sp. (in: Bacteria) | Mutation(s): 0 Gene Names: soxA, sox EC: 1.5.3.1 |  |
UniProt | |||||
Find proteins for P40859 (Bacillus sp. (strain B-0618)) Explore P40859 Go to UniProtKB: P40859 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P40859 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FAD Query on FAD | E [auth A], M [auth B] | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N |  | Ligand Interaction | |
| FOA Query on FOA | F [auth A], G [auth A], L [auth B], N [auth B] | 2-FUROIC ACID C5 H4 O3 SMNDYUVBFMFKNZ-UHFFFAOYSA-N |  | Ligand Interaction | |
| PO4 Query on PO4 | D [auth A], J [auth B], K [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| GOL Query on GOL | H [auth A], O [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| CL Query on CL | C [auth A], I [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.30 Å
- R-Value Free: 0.195
- R-Value Work: 0.170
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 72.727 | α = 90 |
| b = 69.44 | β = 94.16 |
| c = 73.671 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| CNS | phasing |
Entry History
Deposition Data
- Deposited Date: 2006-03-21
- Released Date: 2007-02-06 Deposition Author(s): Chen, Z., Trickey, P., Jorns, M.S., Mathews, F.S.
Revision History (Full details and data files)
- Version 1.0: 2007-02-06
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.3: 2012-03-28
Changes: Non-polymer description
