2GDQ

Crystal structure of mandelate racemase/muconate lactonizing enzyme from Bacillus subtilis at 1.8 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.197 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Crystal structure of mandelate racemase/muconate lactonizing enzyme from Bacillus subtilis at 1.8 A resolution

Malashkevich, V.N.Toro, R.Sauder, J.M.Schwinn, K.D.Emtage, S.Thompson, D.A.Rutter, M.E.Dickey, M.Groshong, C.Bain, K.T.Adams, J.M.Reyes, C.Rooney, I.Powell, A.Boice, A.Gheyi, T.Ozyurt, S.Atwell, S.Wasserman, S.R.Burley, S.K.Sali, A.Babbitt, P.Pieper, U.Gerlt, J.A.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
yitF
A, B
382Bacillus subtilis (strain 168)Mutation(s): 0 
Gene Names: yitF
EC: 5.-.-.-
Find proteins for O06741 (Bacillus subtilis (strain 168))
Go to UniProtKB:  O06741
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.197 
  • Space Group: I 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 82.374α = 90.00
b = 113.246β = 90.00
c = 168.612γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SCALEPACKdata scaling
HKL-2000data reduction
DENZOdata reduction
PDB_EXTRACTdata extraction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2006-04-04
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Source and taxonomy, Version format compliance
  • Version 1.3: 2017-10-18
    Type: Refinement description
  • Version 1.4: 2018-11-14
    Type: Data collection, Structure summary