2F46

Crystal structure of a putative phosphatase (nma1982) from neisseria meningitidis z2491 at 1.41 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.41 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.200 
  • R-Value Observed: 0.201 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of NMA1982 from Neisseria meningitidis at 1.5 A resolution provides a structural scaffold for nonclassical, eukaryotic-like phosphatases.

Krishna, S.S.Tautz, L.Xu, Q.McMullan, D.Miller, M.D.Abdubek, P.Ambing, E.Astakhova, T.Axelrod, H.L.Carlton, D.Chiu, H.J.Clayton, T.DiDonato, M.Duan, L.Elsliger, M.A.Grzechnik, S.K.Hale, J.Hampton, E.Han, G.W.Haugen, J.Jaroszewski, L.Jin, K.K.Klock, H.E.Knuth, M.W.Koesema, E.Morse, A.T.Mustelin, T.Nigoghossian, E.Oommachen, S.Reyes, R.Rife, C.L.van den Bedem, H.Weekes, D.White, A.Hodgson, K.O.Wooley, J.Deacon, A.M.Godzik, A.Lesley, S.A.Wilson, I.A.

(2007) Proteins 69: 415-421


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
hypothetical protein
A, B
156Neisseria meningitidis Z2491Mutation(s): 3 
Gene Names: 7380613
Find proteins for A1KVD0 (Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18))
Go to UniProtKB:  A1KVD0
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
UNL
Query on UNL

Download CCD File 
B
Unknown ligand
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A,B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.41 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.200 
  • R-Value Observed: 0.201 
  • Space Group: C 1 2 1
  • Diffraction Data DOI: 2F46 Protein Diffraction
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 144.278α = 90
b = 33.466β = 96.18
c = 59.899γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
SCALAdata scaling
PDB_EXTRACTdata extraction
MOSFLMdata reduction
CCP4data scaling
SOLVEphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-02-07
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance