2EBA

Crystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.21 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.260 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilus

Kumarevel, T.S.Karthe, P.Kuramitsu, S.Yokoyama, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative glutaryl-CoA dehydrogenase
A, C, D, E, F, G, H, I
385Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Mutation(s): 0 
Find proteins for Q5SK63 (Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
Go to UniProtKB:  Q5SK63
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FAD
Query on FAD

Download SDF File 
Download CCD File 
A, C, D, E, F, G, H, I
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.21 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.260 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 75.239α = 75.92
b = 86.239β = 81.25
c = 157.418γ = 64.24
Software Package:
Software NamePurpose
BSSdata collection
HKL-2000data reduction
CNSrefinement
HKL-2000data scaling
CCP4phasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-04-01
    Type: Initial release
  • Version 1.1: 2007-11-28
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Source and taxonomy, Version format compliance