2E6K

X-ray structure of Thermus thermopilus HB8 TT0505


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.217 
  • R-Value Observed: 0.217 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

X-ray structure of Thermus thermophilus HB8 TT0505

Yoshida, H.Kamitori, S.Agari, Y.Iino, H.Kanagawa, M.Nakagawa, N.Ebihara, A.Kuramitsu, S.Yokoyama, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
TransketolaseA, B, C, D651Thermus thermophilus HB8Mutation(s): 0 
Gene Names: tt0505TTHA0108
EC: 2.2.1.1
UniProt
Find proteins for Q5SM35 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SM35 
Go to UniProtKB:  Q5SM35
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SM35
Protein Feature View
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.217 
  • R-Value Observed: 0.217 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 72.61α = 72.48
b = 88.96β = 89.13
c = 117.18γ = 73.36
Software Package:
Software NamePurpose
CNSrefinement
HKL-2000data collection
d*TREKdata reduction
d*TREKdata scaling
MOLREPphasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-11-13
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Derived calculations, Source and taxonomy, Version format compliance