2DMH | pdb_00002dmh

Solution structure of the first C2 domain of human myoferlin

PDB DOI: https://doi.org/10.2210/pdb2DMH/pdb

Classification: LIPID BINDING PROTEIN
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2006-04-21 Released: 2006-10-21
Deposition Author(s): Nagashima, T., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2DMH

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of the first C2 domain of human myoferlin

Nagashima, T., Hayashi, F., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 15.02 kDa
Atom Count: 1,056
Modeled Residue Count: 140
Deposited Residue Count: 140
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Myoferlin	A	140	Homo sapiens	Mutation(s): 0 Gene Names: FER1L3, KIAA1207, MYOF
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NZM1 (Homo sapiens) Explore Q9NZM1 Go to UniProtKB: Q9NZM1
PHAROS: Q9NZM1 GTEx: ENSG00000138119
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9NZM1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2006-10-21

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2006-10-21
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-09
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.