2DMG | pdb_00002dmg

Solution structure of the third C2 domain of KIAA1228 protein

PDB DOI: https://doi.org/10.2210/pdb2DMG/pdb

Classification: LIPID BINDING PROTEIN
Organism(s): Homo sapiens
Mutation(s): No
Membrane Protein: Yes OPM

Deposited: 2006-04-21 Released: 2006-10-21
Deposition Author(s): Nagashima, T., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2DMG

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of the third C2 domain of KIAA1228 protein

Nagashima, T., Hayashi, F., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 15.59 kDa
Atom Count: 1,096
Modeled Residue Count: 142
Deposited Residue Count: 142
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
KIAA1228 protein	A	142	Homo sapiens	Mutation(s): 0 Gene Names: KIAA1228 Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for A0FGR8 (Homo sapiens) Explore A0FGR8 Go to UniProtKB: A0FGR8
PHAROS: A0FGR8 GTEx: ENSG00000117868
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0FGR8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2006-10-21

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2006-10-21
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-09
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.