2DLD

D-LACTATE DEHYDROGENASE COMPLEXED WITH NADH AND OXAMATE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.297 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Dehydrogenases Engineering to Correct Substrate Inhibition in a Commercial Dehydrogenase

Bernard, N.Delcour, J.Alvarez, A.Cortes, A.Willis, C.Holbrook, J.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
D-LACTATE DEHYDROGENASE
A, B
337Lactobacillus helveticusMutation(s): 0 
EC: 1.1.1.28
Find proteins for P30901 (Lactobacillus helveticus)
Go to UniProtKB:  P30901
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
OXM
Query on OXM

Download SDF File 
Download CCD File 
A, B
OXAMIC ACID
C2 H3 N O3
SOWBFZRMHSNYGE-UHFFFAOYSA-N
 Ligand Interaction
NAI
Query on NAI

Download SDF File 
Download CCD File 
A, B
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
NADH
C21 H29 N7 O14 P2
BOPGDPNILDQYTO-NNYOXOHSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.297 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 86.200α = 90.00
b = 62.100β = 113.20
c = 77.400γ = 90.00
Software Package:
Software NamePurpose
PROLSQrefinement
XENGENdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1996-03-14
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2013-11-06
    Type: Non-polymer description