2DCK

A tetragonal-lattice structure of alkaliphilic XynJ from Bacillus sp. 41M-1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.167 
  • R-Value Observed: 0.168 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1

IhsanawatiTanaka, N.Nakamura, S.Kumasaka, T.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
xylanase JA354Bacillus sp. 41M-1Mutation(s): 0 
Gene Names: xynJ
EC: 3.2.1.8
UniProt
Find proteins for Q9RC94 (Bacillus sp. 41M-1)
Explore Q9RC94 
Go to UniProtKB:  Q9RC94
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9RC94
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.167 
  • R-Value Observed: 0.168 
  • Space Group: P 43
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 116.579α = 90
b = 116.579β = 90
c = 45.909γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
MOLREPphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-03-20
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Source and taxonomy, Version format compliance