2DAS

Solution structure of TRASH domain of zinc finger MYM-type protein 5

• PDB DOI: https://doi.org/10.2210/pdb2DAS/pdb

• Classification: METAL TRANSPORT
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2005-12-14 Released: 2006-06-14 
• Deposition Author(s): Niraula, T.N., Tomizawa, T., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function, structures with the least restraint violations 

Literature

Solution structure of TRASH domain of zinc finger MYM-type protein 5

Niraula, T.N., Tomizawa, T., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 6.4 kDa 
• Atom Count: 440 
• Modelled Residue Count: 62 
• Deposited Residue Count: 62 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Zinc finger MYM-type protein 5	A	62	Homo sapiens	Mutation(s): 0  Gene Names: ZMYM5
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UJ78 (Homo sapiens) Explore Q9UJ78  Go to UniProtKB:  Q9UJ78
PHAROS:  Q9UJ78 GTEx:  ENSG00000132950

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function, structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-06-14 
Deposition Author(s): Niraula, T.N., Tomizawa, T., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2006-06-14
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-09
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-05-29
  Changes: Data collection