Download MendeleyCrystal Structure of tt0972 protein from Thermus thermophilus
Kumei, M., Inagaki, E., Nakano, N., Shinkai, A., Yokoyama, S.To be published.
2CZ8
Crystal Structure of tt0972 protein from Thermus thermophilus
- PDB DOI: https://doi.org/10.2210/pdb2CZ8/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Thermus thermophilus HB8
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2005-07-11 Released: 2006-09-19
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.229
- R-Value Work: 0.205
- R-Value Observed: 0.205
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| tt0972 protein | 69 | Thermus thermophilus HB8 | Mutation(s): 0 Gene Names: TTHA1431 |  | |
UniProt | |||||
Find proteins for Q5SIE3 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SIE3 Go to UniProtKB: Q5SIE3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5SIE3 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FAD Query on FAD | CA [auth H], K [auth A], M [auth B], O [auth C], R [auth D], | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N |  | Ligand Interaction | |
| PO4 Query on PO4 | AA [auth H], BA [auth H], I [auth A], L [auth B], P [auth D], | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| K Query on K | J [auth A], N [auth C], T [auth E], Y [auth G] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.229
- R-Value Work: 0.205
- R-Value Observed: 0.205
- Space Group: P 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 66.36 | α = 90 |
| b = 66.36 | β = 90 |
| c = 124.566 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| BSS | data collection |
| SCALEPACK | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2006-09-19 Deposition Author(s): Kumei, M., Inagaki, E., Nakano, N., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2006-09-19
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Source and taxonomy, Version format compliance
