2CZ8

Crystal Structure of tt0972 protein from Thermus thermophilus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.205 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.2 of the entry. See complete history


Literature

Crystal Structure of tt0972 protein from Thermus thermophilus

Kumei, M.Inagaki, E.Nakano, N.Shinkai, A.Yokoyama, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
tt0972 proteinA, B, C, D, E, F, G, H69Thermus thermophilus HB8Mutation(s): 0 
Gene Names: TTHA1431
UniProt
Find proteins for Q5SIE3 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SIE3 
Go to UniProtKB:  Q5SIE3
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FAD (Subject of Investigation/LOI)
Query on FAD

Download Ideal Coordinates CCD File 
CA [auth H], K [auth A], M [auth B], O [auth C], R [auth D], U [auth E], W [auth F], Z [auth G]FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
 Ligand Interaction
PO4
Query on PO4

Download Ideal Coordinates CCD File 
AA [auth H] , BA [auth H] , I [auth A] , L [auth B] , P [auth D] , Q [auth D] , S [auth E] , V [auth F] , 
AA [auth H], BA [auth H], I [auth A], L [auth B], P [auth D], Q [auth D], S [auth E], V [auth F], X [auth G]
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
K
Query on K

Download Ideal Coordinates CCD File 
J [auth A], N [auth C], T [auth E], Y [auth G]POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.205 
  • Space Group: P 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 66.36α = 90
b = 66.36β = 90
c = 124.566γ = 120
Software Package:
Software NamePurpose
CNSrefinement
BSSdata collection
SCALEPACKdata scaling
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment  



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2006-09-19
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Derived calculations, Source and taxonomy, Version format compliance