2BLG | pdb_00002blg

STRUCTURAL BASIS OF THE TANFORD TRANSITION OF BOVINE BETA-LACTOGLOBULIN FROM CRYSTAL STRUCTURES AT THREE PH VALUES; PH 8.2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free: 
    0.277 (Depositor), 0.251 (DCC) 
  • R-Value Work: 
    0.232 (Depositor), 0.219 (DCC) 
  • R-Value Observed: 
    0.232 (Depositor) 

wwPDB Validation 3D Report Full Report

Validation slider image for 2BLG

This is version 1.4 of the entry. See complete history

Literature

Structural basis of the Tanford transition of bovine beta-lactoglobulin.

Qin, B.Y.Bewley, M.C.Creamer, L.K.Baker, H.M.Baker, E.N.Jameson, G.B.

(1998) Biochemistry 37: 14014-14023

  • DOI: https://doi.org/10.1021/bi981016t
  • Primary Citation Related Structures: 
    1BSY, 2BLG, 3BLG

  • PubMed Abstract: 

    The structures of the trigonal crystal form of bovine beta-lactoglobulin variant A at pH 6.2, 7.1, and 8.2 have been determined by X-ray diffraction methods at a resolution of 2.56, 2. 24, and 2.49 A, respectively. The corresponding values for R (Rfree) are 0.192 (0.240), 0.234 (0.279), and 0.232 (0.277). The C and N termini as well as two disulfide bonds are clearly defined in these models. The glutamate side chain of residue 89 is buried at pH 6.2 and becomes exposed at pH 7.1 and 8.2. This conformational change, involving the loop 85-90, provides a structural basis for a variety of pH-dependent chemical, physical, and spectroscopic phenomena, collectively known as the Tanford transition.


  • Organizational Affiliation
    • Centre for Structural Biology, Institutes of Fundamental Sciences and Molecular Biosciences, Massey University, Palmerston North, New Zealand.

Macromolecule Content 

  • Total Structure Weight: 18.39 kDa 
  • Atom Count: 1,387 
  • Modeled Residue Count: 162 
  • Deposited Residue Count: 162 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
BETA-LACTOGLOBULIN162Bos taurusMutation(s): 0 
UniProt
Find proteins for P02754 (Bos taurus)
Explore P02754 
Go to UniProtKB:  P02754
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP02754
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free:  0.277 (Depositor), 0.251 (DCC) 
  • R-Value Work:  0.232 (Depositor), 0.219 (DCC) 
  • R-Value Observed: 0.232 (Depositor) 
Space Group: P 32 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.29α = 90
b = 54.29β = 90
c = 113.18γ = 120
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing
X-PLORrefinement

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1999-01-27
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2021-07-28
    Changes: Refinement description
  • Version 1.4: 2024-10-30
    Changes: Data collection, Database references, Structure summary