Macromolecule Content

Total Structure Weight: 154.95 kDa
Atom Count: 12077
Modelled Residue Count: 1273
Deposited Residue Count: 1292
Unique protein chains: 1

2B81

Crystal Structure of the Luciferase-like Monooxygenase from Bacillus cereus

DOI: 10.2210/pdb2B81/pdb

Classification: OXIDOREDUCTASE
Organism(s): Bacillus cereus
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2005-10-06 Released: 2005-11-22
Deposition Author(s): Kim, Y., Li, H., Moy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.218
R-Value Work: 0.183
R-Value Observed: 0.186

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal Structure of the Luciferase-like Monooxygenase from Bacillus cereus

Kim, Y., Li, H., Moy, S., Collart, F., Joachimiak, A.

To be published.

Macromolecules

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(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Luciferase-like monooxygenase	A, B, C, D	323	Bacillus cereus	Mutation(s): 10 EC: 1.14
Find proteins for Q81B18 (Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)) Explore Q81B18 Go to UniProtKB: Q81B18
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
MES Query on MES Download Ideal Coordinates CCD File SDF format, chain AA [B] SDF format, chain NA [C] SDF format, chain Q [A] SDF format, chain R [A] SDF format, chain ZA [D] MOL2 format, chain AA [B] MOL2 format, chain NA [C] MOL2 format, chain Q [A] MOL2 format, chain R [A] MOL2 format, chain ZA [D]	A, B, C, D	2-(N-MORPHOLINO)-ETHANESULFONIC ACID C₆ H₁₃ N O₄ S SXGZJKUKBWWHRA-UHFFFAOYSA-N		Ligand Interaction
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain CA [C] SDF format, chain DA [C] SDF format, chain E [A] SDF format, chain EA [C] SDF format, chain F [A] SDF format, chain FA [C] SDF format, chain G [A] SDF format, chain GA [C] SDF format, chain H [A] SDF format, chain HA [C] SDF format, chain I [A] SDF format, chain IA [C] SDF format, chain J [A] SDF format, chain JA [C] SDF format, chain K [A] SDF format, chain KA [C] SDF format, chain L [A] SDF format, chain LA [C] SDF format, chain M [A] SDF format, chain MA [C] SDF format, chain N [A] SDF format, chain O [A] SDF format, chain P [A] SDF format, chain PA [D] SDF format, chain QA [D] SDF format, chain RA [D] SDF format, chain SA [D] SDF format, chain TA [D] SDF format, chain U [B] SDF format, chain UA [D] SDF format, chain V [B] SDF format, chain VA [D] SDF format, chain W [B] SDF format, chain WA [D] SDF format, chain X [B] SDF format, chain XA [D] SDF format, chain Y [B] SDF format, chain YA [D] SDF format, chain Z [B] MOL2 format, chain CA [C] MOL2 format, chain DA [C] MOL2 format, chain E [A] MOL2 format, chain EA [C] MOL2 format, chain F [A] MOL2 format, chain FA [C] MOL2 format, chain G [A] MOL2 format, chain GA [C] MOL2 format, chain H [A] MOL2 format, chain HA [C] MOL2 format, chain I [A] MOL2 format, chain IA [C] MOL2 format, chain J [A] MOL2 format, chain JA [C] MOL2 format, chain K [A] MOL2 format, chain KA [C] MOL2 format, chain L [A] MOL2 format, chain LA [C] MOL2 format, chain M [A] MOL2 format, chain MA [C] MOL2 format, chain N [A] MOL2 format, chain O [A] MOL2 format, chain P [A] MOL2 format, chain PA [D] MOL2 format, chain QA [D] MOL2 format, chain RA [D] MOL2 format, chain SA [D] MOL2 format, chain TA [D] MOL2 format, chain U [B] MOL2 format, chain UA [D] MOL2 format, chain V [B] MOL2 format, chain VA [D] MOL2 format, chain W [B] MOL2 format, chain WA [D] MOL2 format, chain X [B] MOL2 format, chain XA [D] MOL2 format, chain Y [B] MOL2 format, chain YA [D] MOL2 format, chain Z [B]	A, B, C, D	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Ligand Interaction
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain AB [D] SDF format, chain BA [B] SDF format, chain OA [C] SDF format, chain S [A] SDF format, chain T [A] MOL2 format, chain AB [D] MOL2 format, chain BA [B] MOL2 format, chain OA [C] MOL2 format, chain S [A] MOL2 format, chain T [A]	A, B, C, D	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Ligand Interaction

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A,B,C,D	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.218
R-Value Work: 0.183
R-Value Observed: 0.186
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 138.466	α = 90
b = 159.942	β = 90
c = 172.914	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
SBC-Collect	data collection
HKL-2000	data reduction
HKL-2000	data scaling
CNS	phasing
HKL-3000	phasing
SHELXD	phasing
SOLVE	phasing
RESOLVE	phasing
MLPHARE	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2005-10-06
Released Date: 2005-11-22

Deposition Author(s):

Midwest Center for Structural Genomics (MCSG)

Revision History (Full details and data files)

Version 1.0: 2005-11-22
Type: Initial release
Version 1.1: 2008-05-01
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance

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Deposition Help & Resources

176528 Biological Macromolecular Structures Enabling Breakthroughs in Research and Education

2B81

Crystal Structure of the Luciferase-like Monooxygenase from Bacillus cereus

Crystal Structure of the Luciferase-like Monooxygenase from Bacillus cereus

Entity ID: 1

Protein Feature View

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Experimental Data

Structure Validation

Deposition Data

Revision History (Full details and data files)