2AEE

Crystal structure of Orotate phosphoribosyltransferase from Streptococcus pyogenes


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.189 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of Orotate phosphoribosyltransferase from Streptococcus pyogenes

Chang, C.Li, H.Collart, F.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Orotate phosphoribosyltransferase
A, B
211Streptococcus pyogenes serotype M1Mutation(s): 0 
Gene Names: pyrE
EC: 2.4.2.10
Find proteins for Q9A076 (Streptococcus pyogenes serotype M1)
Go to UniProtKB:  Q9A076
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

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Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
CL
Query on CL

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Download CCD File 
B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.189 
  • Space Group: P 42 21 2
Unit Cell:
Length (Å)Angle (°)
a = 118.131α = 90.00
b = 118.131β = 90.00
c = 72.185γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
HKL-3000phasing
SHELXDphasing
MLPHAREphasing
Omodel building
HKL-2000data reduction
SHELXEmodel building
SOLVEphasing
CCP4phasing
Cootmodel building
SCALEPACKdata scaling
RESOLVEphasing
DMphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-09-06
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Version format compliance