Download MendeleyCrystal structure of the ROK family transcriptional regulator, homolog of E.coli MLC protein.
Minasov, G., Brunzelle, J.S., Shuvalova, L., Collart, F.R., Anderson, W.F.To be published.
1Z05
Crystal structure of the ROK family transcriptional regulator, homolog of E.coli MLC protein.
- PDB DOI: https://doi.org/10.2210/pdb1Z05/pdb
- Classification: TRANSCRIPTION
- Organism(s): Vibrio cholerae O1 biovar El Tor str. N16961
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2005-03-01 Released: 2005-03-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.224
- R-Value Work: 0.185
- R-Value Observed: 0.187
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| transcriptional regulator, ROK family | A | 429 | Vibrio cholerae O1 biovar El Tor str. N16961 | Mutation(s): 0 Gene Names: AAF95155, VC_2007 |  |
UniProt | |||||
Find proteins for Q9KQJ1 (Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)) Explore Q9KQJ1 Go to UniProtKB: Q9KQJ1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9KQJ1 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | C [auth A], D [auth A], E [auth A], F [auth A], G [auth A], | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | Ligand Interaction | |
| GOL Query on GOL | J [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| BME Query on BME | I [auth A] | BETA-MERCAPTOETHANOL C2 H6 O S DGVVWUTYPXICAM-UHFFFAOYSA-N |  | Ligand Interaction | |
| ZN Query on ZN | B [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.224
- R-Value Work: 0.185
- R-Value Observed: 0.187
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 93.719 | α = 90 |
| b = 93.719 | β = 90 |
| c = 118.291 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| PHENIX | phasing |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2005-03-08 Deposition Author(s): Minasov, G., Brunzelle, J.S., Shuvalova, L., Collart, F.R., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2005-03-08
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.3: 2017-10-11
Changes: Refinement description - Version 1.4: 2018-06-27
Changes: Data collection, Database references
