Crystal Structure of the Conserved Methyltransferase from Streptococcus pneumoniae TIGR4
Kim, Y., Li, H., Collart, F., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
tRNA (guanine-N(7)-)-methyltransferase | 214 | Streptococcus pneumoniae | Mutation(s): 4  Gene Names: trmB, SP0550 EC: 2.1.1.33 | ||
UniProt | |||||
Find proteins for P67506 (Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)) Explore P67506  Go to UniProtKB:  P67506 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P67506 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | C [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 165.613 | α = 90 |
b = 41.253 | β = 111.87 |
c = 78.658 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
SBC-Collect | data collection |
HKL-2000 | data scaling |
HKL-3000 | phasing |