1YIS

Structural genomics of Caenorhabditis elegans: adenylosuccinate lyase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.202 
  • R-Value Work: 0.174 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural genomics of Caenorhabditis elegans: adenylosuccinate lyase

Symersky, J.Schormann, N.Lu, S.Zhang, Y.Karpova, E.Qiu, S.Huang, W.Cao, Z.Zhou, J.Luo, M.Arabshahi, A.McKinstry, A.Luan, C.-H.Luo, D.Johnson, D.An, J.Tsao, J.Delucas, L.Shang, Q.Gray, R.Li, S.Bray, T.Chen, Y.-J.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
adenylosuccinate lyaseA478Caenorhabditis elegansMutation(s): 12 
Gene Names: adsl-1R06C7.5
EC: 4.3.2.2
UniProt
Find proteins for Q21774 (Caenorhabditis elegans)
Explore Q21774 
Go to UniProtKB:  Q21774
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
B [auth A]SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
AL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.202 
  • R-Value Work: 0.174 
  • Space Group: I 4 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 124.242α = 90
b = 124.242β = 90
c = 165.127γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
HKL-2000data reduction
SOLVEphasing
RESOLVEmodel building
CNSrefinement
HKL-2000data scaling
RESOLVEphasing

Structure Validation

View Full Validation Report




Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2005-01-25
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Derived calculations, Version format compliance