1X6I

Crystal structure of ygfY from Escherichia coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.20 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.171 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal structure of the YgfY from Escherichia coli, a protein that may be involved in transcriptional regulation

Lim, K.Doseeva, V.Sarikaya Demirkan, E.Pullalarevu, S.Krajewski, W.Galkin, A.Howard, A.Herzberg, O.

(2005) Proteins 58: 759-763


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Hypothetical protein ygfYA, B91Escherichia coliMutation(s): 0 
Gene Names: ygfY
UniProt
Find proteins for P64559 (Escherichia coli (strain K12))
Explore P64559 
Go to UniProtKB:  P64559
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.20 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.171 
  • Space Group: P 21 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 43.5α = 90
b = 87.1β = 90
c = 40.8γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
CrystalCleardata reduction
MLPHAREphasing
RESOLVEmodel building
CNSrefinement
HKL-2000data collection
HKL-2000data reduction
CrystalCleardata scaling
RESOLVEphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2005-02-08
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2019-07-24
    Changes: Data collection, Refinement description
  • Version 1.4: 2019-08-14
    Changes: Data collection