Complex structure of kinase domain of DAP kinase with BDB402
Ueda, Y., Ogata, H., Yamakawa, A., Higuchi, Y.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Death-associated protein kinase 1 | A | 278 | Homo sapiens | Mutation(s): 0  Gene Names: DAPK1, DAPK EC: 2.7.1.37 (PDB Primary Data), 2.7.11.1 (UniProt) | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P53355 (Homo sapiens) Explore P53355  Go to UniProtKB:  P53355 | |||||
PHAROS:  P53355 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P53355 | ||||
Protein Feature ViewExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BD4 Query on BD4 | B [auth A] | 6-(3-AMINOPROPYL)-4,9-DIMETHYLPYRROLO[3,4-C]CARBAZOLE-1,3(2H,6H)-DIONE C19 H19 N3 O2 PKPNSCZPIWCHMW-UHFFFAOYSA-N | Ligand Interaction |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 77.337 | α = 90 |
b = 108.869 | β = 90 |
c = 50.186 | γ = 90 |
Software Name | Purpose |
---|---|
CNS | refinement |
MOSFLM | data reduction |
CCP4 | data scaling |
CNS | phasing |