1WJU | pdb_00001wju

Solution structure of N-terminal ubiquitin-like domain of human NEDD8 ultimate buster-1

PDB DOI: https://doi.org/10.2210/pdb1WJU/pdb
BMRB: 10050

Classification: PROTEIN BINDING
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2004-05-29 Released: 2004-11-29
Deposition Author(s): Yoneyama, M., Koshiba, S., Tochio, N., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, target function

wwPDB Validation 3D Report Full Report

Validation slider image for 1WJU

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of N-terminal ubiquitin-like domain of human NEDD8 ultimate buster-1

Yoneyama, M., Koshiba, S., Tochio, N., Inoue, M., Kigawa, T., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 11.04 kDa
Atom Count: 774
Modeled Residue Count: 100
Deposited Residue Count: 100
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NEDD8 ultimate buster-1	A	100	Homo sapiens	Mutation(s): 0 Gene Names: IMS cDNA SYN05355
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y5A7 (Homo sapiens) Explore Q9Y5A7 Go to UniProtKB: Q9Y5A7
PHAROS: Q9Y5A7 GTEx: ENSG00000013374
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9Y5A7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, target function

Structure Validation

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Entry History

Deposition Data

Released Date: 2004-11-29

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2004-11-29
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-02
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.