1VQB

GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Work: 0.198 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structure of the gene V protein of bacteriophage f1 determined by multiwavelength x-ray diffraction on the selenomethionyl protein.

Skinner, M.M.Zhang, H.Leschnitzer, D.H.Guan, Y.Bellamy, H.Sweet, R.M.Gray, C.W.Konings, R.N.Wang, A.H.Terwilliger, T.C.

(1994) Proc.Natl.Acad.Sci.USA 91: 2071-2075


  • PubMed Abstract: 
  • The crystal structure of the dimeric gene V protein of bacteriophage f1 was determined using multiwavelength anomalous diffraction on the selenomethionine-containing wild-type and isoleucine-47-->methionine mutant proteins with x-ray diffraction data ...

    The crystal structure of the dimeric gene V protein of bacteriophage f1 was determined using multiwavelength anomalous diffraction on the selenomethionine-containing wild-type and isoleucine-47-->methionine mutant proteins with x-ray diffraction data phased to 2.5 A resolution. The structure of the wild-type protein has been refined to an R factor of 19.2% using native data to 1.8 A resolution. The structure of the gene V protein was used to obtain a model for the protein portion of the gene V protein-single-stranded DNA complex.


    Related Citations: 
    • Context-Dependence of Mutational Effects in a Protein: The Crystal Structures of the V35I, I47V and V35I/I47V Gene V Protein Core Mutants
      Zhang, H.,Skinner, M.M.,Sandberg, W.S.,Wang, A.H.-J.,Terwilliger, T.C.
      () TO BE PUBLISHED --: --
    • Difference Refinement: Obtaining Differences between Two Related Structures
      Terwilliger, T.C.,Berendzen, J.
      (1995) Acta Crystallogr.,Sect.D 51: 609


    Organizational Affiliation

    Life Sciences Division, Los Alamos National Laboratory, NM 87545.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
GENE V PROTEIN
A
87Enterobacteria phage f1Mutation(s): 0 
Gene Names: V
Find proteins for P69543 (Enterobacteria phage f1)
Go to UniProtKB:  P69543
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Work: 0.198 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 76.190α = 90.00
b = 28.110β = 103.54
c = 42.740γ = 90.00
Software Package:
Software NamePurpose
X-PLORrefinement
MARdata reduction
X-PLORmodel building
X-PLORphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1997-02-12
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2011-11-16
    Type: Atomic model