1ULR

Crystal structure of tt0497 from Thermus thermophilus HB8

PDB DOI: https://doi.org/10.2210/pdb1ULR/pdb

Classification: HYDROLASE
Organism(s): Thermus thermophilus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2003-09-16 Released: 2004-11-02
Deposition Author(s): Ago, H., Hamada, K., Sugahara, M., Kuroishi, C., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.30 Å
R-Value Free: 0.216
R-Value Work: 0.187
R-Value Observed: 0.190

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal structure of tt0497 from Thermus thermophilus HB8

Ago, H., Hamada, K., Sugahara, M., Kuroishi, C., Kuramitsu, S., Yokoyama, S., Miyano, M.

To be published.

Macromolecule Content

Total Structure Weight: 9.69 kDa
Atom Count: 828
Modelled Residue Count: 87
Deposited Residue Count: 88
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
putative acylphosphatase	A	88	Thermus thermophilus	Mutation(s): 0 EC: 3.6.1.7
UniProt
Find proteins for Q5SKS6 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SKS6 Go to UniProtKB: Q5SKS6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q5SKS6
Protein Feature View Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.30 Å
R-Value Free: 0.216
R-Value Work: 0.187
R-Value Observed: 0.190
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 29.911	α = 90
b = 45.727	β = 90
c = 49.958	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
CrystalClear	data reduction
CrystalClear	data scaling
AMoRE	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2004-11-02

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2004-11-02
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.