1UF3

Crystal structure of TT1561 of thermus thermophilus HB8

• PDB DOI:  https://doi.org/10.2210/pdb1UF3/pdb

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Thermus thermophilus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2003-05-23 Released: 2003-11-23 
• Deposition Author(s): Kato-Murayama, M., Shirouzu, M., Terada, T., Murayama, K., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 0.245 
• R-Value Work: 0.195 

Literature

Crystal structure of TT1561 of thermus thermophilus HB8

Kato-Murayama, M., Shirouzu, M., Terada, T., Murayama, K., Kuramitsu, S., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 8-mer - A8 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 208.43 kDa 
• Atom Count: 15,287 
• Modelled Residue Count: 1,819 
• Deposited Residue Count: 1,824 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
hypothetical protein TT1561	A, B, C, D, E, F, G, H	228	Thermus thermophilus	Mutation(s): 0  Gene Names: tthHB8IM

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
CA	I [auth A], J [auth A], K [auth B], L [auth C], M [auth C], N [auth D], O [auth D], P [auth E], Q [auth E], R [auth F], S [auth F], T [auth G], U [auth G], V [auth H]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B, C, D, E, F, G, H	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 0.245 
• R-Value Work: 0.195 
• Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 212.384	α = 90
b = 77.342	β = 127.21
c = 147.804	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling
SOLVE	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2003-11-23 
Deposition Author(s): Kato-Murayama, M., Shirouzu, M., Terada, T., Murayama, K., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2003-11-23
  Type: Initial release
  
• Version 1.1: 2008-04-27
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance