Download MendeleyHypothetical Protein from Vibrio cholerae O1 biovar eltor str. N16961
Binkowski, T.A., Wu, R., Moy, S.F., Joachimiak, A.To be published.
1U9D
Structure of Protein of Unknown Function from Vibrio cholerae O1 biovar eltor str. N16961
- PDB DOI: https://doi.org/10.2210/pdb1U9D/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Vibrio cholerae O1 biovar El Tor str. N16961
- Expression System: Escherichia coli BL21
- Mutation(s): Yes
- Deposited: 2004-08-09 Released: 2004-09-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.237
- R-Value Work: 0.189
- R-Value Observed: 0.191
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| hypothetical protein VC0714 | 122 | Vibrio cholerae O1 biovar El Tor str. N16961 | Mutation(s): 2 Gene Names: VC0714, VC_0714 |  | |
UniProt | |||||
Find proteins for Q9KU16 (Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)) Explore Q9KU16 Go to UniProtKB: Q9KU16 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9KU16 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | C [auth A], D [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.237
- R-Value Work: 0.189
- R-Value Observed: 0.191
- Space Group: P 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 66.006 | α = 90 |
| b = 66.006 | β = 90 |
| c = 47.831 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| d*TREK | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2004-09-21 Deposition Author(s): Binkowski, T.A., Wu, R., Moy, S.F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2004-09-21
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance
