Download MendeleyCrystal structure of Mycobacterium tuberculosis citrate lyase beta subunit and its unusual triphosphate binding site
Goulding, C.W., Lerkin, T., Kim, C.Y., Segelke, B., Terwilliger, T., Eisenberg, E.To be published.
1U5V
Structure of CitE complexed with triphosphate group of ATP form Mycobacterium tuberculosis
- DOI: 10.2210/pdb1U5V/pdb
- Classification: LYASE
- Organism(s): Mycobacterium tuberculosis
- Expression System: Escherichia coli K-12
- Mutation(s): Yes
- Deposited: 2004-07-28 Released: 2004-10-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.234
- R-Value Work: 0.212
- R-Value Observed: 0.212
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| citE | A | 273 | Mycobacterium tuberculosis | Mutation(s): 6 Gene Names: Rv2498c EC: 4.1.3.6 (PDB Primary Data), 4.1 (UniProt) |  |
Find proteins for P9WPE1 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WPE1 Go to UniProtKB: P9WPE1 | |||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ATP Query on ATP | A | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N |  | Ligand Interaction | |
| FMT Query on FMT | A | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.234
- R-Value Work: 0.212
- R-Value Observed: 0.212
- Space Group: H 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 91.214 | α = 90 |
| b = 91.214 | β = 90 |
| c = 220.233 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| EPMR | phasing |
Entry History
Deposition Data
- Deposited Date: 2004-07-28
- Released Date: 2004-10-12 Deposition Author(s): Goulding, C.W., Lerkin, T., Kim, C.Y., Segelke, B., Terwilliger, T., Eisenberg, E., TB Structural Genomics Consortium (TBSGC)
Revision History (Full details and data files)
- Version 1.0: 2004-10-12
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2016-09-21
Changes: Other - Version 1.4: 2018-10-03
Changes: Data collection, Derived calculations
