1T07 | pdb_00001t07

Crystal Structure of Conserved Protein of Unknown Function PA5148 from Pseudomonas aeruginosa

• PDB DOI: https://doi.org/10.2210/pdb1T07/pdb

• Classification: Structural genomics, unknown function
• Organism(s): Pseudomonas aeruginosa
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 2004-04-07 Released: 2004-08-03 
• Deposition Author(s): Kim, Y., Joachimiak, A., Skarina, T., Savchenko, A., Edwards, A., Midwest Center for Structural Genomics (MCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free: 
  0.240 (Depositor), 0.250 (DCC) 
• R-Value Work: 
  0.192 (Depositor), 0.206 (DCC) 
• R-Value Observed: 
  0.197 (Depositor) 

Literature

Crystal Structure of PA5148 from Pseudomonas aeruginosa

Kim, Y., Joachimiak, A., Skarina, T., Savchenko, A., Edwards, A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 11.26 kDa 
• Atom Count: 835 
• Modeled Residue Count: 81 
• Deposited Residue Count: 94 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hypothetical UPF0269 protein PA5148	A	94	Pseudomonas aeruginosa	Mutation(s): 6  Gene Names: PA5148
UniProt
Find proteins for Q9HU36 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HU36  Go to UniProtKB:  Q9HU36

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free:  0.240 (Depositor), 0.250 (DCC) 
• R-Value Work:  0.192 (Depositor), 0.206 (DCC) 
• R-Value Observed: 0.197 (Depositor) 

Space Group: P 4₂ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 55.574	α = 90
b = 55.574	β = 90
c = 62.412	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
SBC-Collect	data collection
HKL-2000	data reduction
HKL-2000	data scaling
SOLVE	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2004-08-03 
Deposition Author(s): Kim, Y., Joachimiak, A., Skarina, T., Savchenko, A., Edwards, A., Midwest Center for Structural Genomics (MCSG)

Revision History  

• Version 1.0: 2004-08-03
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2024-10-30
  Changes: Data collection, Database references, Derived calculations, Structure summary