1SSK

Structure of the N-terminal RNA-binding Domain of the SARS CoV Nucleocapsid Protein


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Submitted: 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structure of the N-Terminal RNA-Binding Domain of the SARS CoV Nucleocapsid Protein.

Huang, Q.Yu, L.Petros, A.M.Gunasekera, A.Liu, Z.Xu, N.Hajduk, P.Mack, J.Fesik, S.W.Olejniczak, E.T.

(2004) Biochemistry 43: 6059-6063

  • DOI: 10.1021/bi036155b

  • PubMed Abstract: 
  • The severe acute respiratory syndrome (SARS) virus belongs to the Coronaviridea family of viruses. Its virion encodes several proteins including a replicase and four structural proteins. Here we describe the three-dimensional structure of the N-termi ...

    The severe acute respiratory syndrome (SARS) virus belongs to the Coronaviridea family of viruses. Its virion encodes several proteins including a replicase and four structural proteins. Here we describe the three-dimensional structure of the N-terminal domain of the SARS coronavirus (CoV) nucleocapsid protein. The protein consists of a five-stranded beta sheet with a folding topology distinct from other RNA-binding proteins. Single-stranded RNAs bind to the protein surface at the junction between a flexible, positively charged beta hairpin and the core structure. NMR-based screening was used to identify low molecular weight compounds that bind to this site.


    Organizational Affiliation

    Global Pharmaceutical Discovery Division, Abbott Laboratories, Abbott Park, Illinois 60064-6098, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Nucleocapsid protein
A
158Human SARS coronavirusMutation(s): 0 
Gene Names: N
Find proteins for P59595 (Human SARS coronavirus)
Go to UniProtKB:  P59595
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Submitted: 

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2004-06-08
    Type: Initial release
  • Version 1.1: 2008-04-29
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance