1RZO

Agglutinin from Ricinus communis with galactoaza


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.63 Å
  • R-Value Free: 0.276 
  • R-Value Work: 0.225 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structure-function investigation complex of Agglutinin from Ricinus communis with galactoaza

Gabdoulkhakov, A.G.Savochkina, Y.Konareva, N.Krauspenhaar, R.Stoeva, S.Nikonov, S.V.Voelter, W.Betzel, C.Mikhailov, A.M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Agglutinin
A, C
262Ricinus communisMutation(s): 0 
Find proteins for P06750 (Ricinus communis)
Go to UniProtKB:  P06750
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Agglutinin
B, D
262Ricinus communisMutation(s): 0 
Find proteins for P06750 (Ricinus communis)
Go to UniProtKB:  P06750
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B, C, D
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GAL
Query on GAL

Download SDF File 
Download CCD File 
A, B, C, D
BETA-D-GALACTOSE
C6 H12 O6
WQZGKKKJIJFFOK-FPRJBGLDSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.63 Å
  • R-Value Free: 0.276 
  • R-Value Work: 0.225 
  • Space Group: P 32
Unit Cell:
Length (Å)Angle (°)
a = 97.630α = 90.00
b = 97.630β = 90.00
c = 207.827γ = 120.00
Software Package:
Software NamePurpose
CNSrefinement
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2004-12-28
    Type: Initial release
  • Version 1.1: 2008-04-29
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Version format compliance
  • Version 1.3: 2016-10-05
    Type: Database references