1RQ6

Solution structure of ribosomal protein S17E from Methanobacterium Thermoautotrophicum, Northeast Structural Genomics Consortium Target TT802 / Ontario Center for Structural Proteomics Target Mth0803


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 112 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the least restraint violations,target function 

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This is version 1.2 of the entry. See complete history


Literature

The solution structure of ribosomal protein S17E from Methanobacterium thermoautotrophicum: a structural homolog of the FF domain.

Wu, B.Yee, A.Huang, Y.J.Ramelot, T.A.Cort, J.R.Semesi, A.Jung, J.W.Lee, W.Montelione, G.T.Kennedy, M.A.Arrowsmith, C.H.

(2008) Protein Sci 17: 583-588

  • DOI: 10.1110/ps.073272208
  • Primary Citation of Related Structures:  
    1RQ6

  • PubMed Abstract: 
  • The ribosomal protein S17E from the archaeon Methanobacterium thermoautotrophicum is a component of the 30S ribosomal subunit. S17E is a 62-residue protein conserved in archaea and eukaryotes and has no counterparts in bacteria. Mammalian S17E is a phosphoprotein component of eukaryotic ribosomes ...

    The ribosomal protein S17E from the archaeon Methanobacterium thermoautotrophicum is a component of the 30S ribosomal subunit. S17E is a 62-residue protein conserved in archaea and eukaryotes and has no counterparts in bacteria. Mammalian S17E is a phosphoprotein component of eukaryotic ribosomes. Archaeal S17E proteins range from 59 to 79 amino acids, and are about half the length of the eukaryotic homologs which have an additional C-terminal region. Here we report the three-dimensional solution structure of S17E. S17E folds into a small three-helix bundle strikingly similar to the FF domain of human HYPA/FBP11, a novel phosphopeptide-binding fold. S17E bears a conserved positively charged surface acting as a robust scaffold for molecular recognition. The structure of M. thermoautotrophicum S17E provides a template for homology modeling of eukaryotic S17E proteins in the family.


    Organizational Affiliation

    Division of Cancer Genomics and Proteomics, Ontario Cancer Institute, Toronto, Ontario M5G 2M9, Canada.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S17e A62Methanothermobacter thermautotrophicusMutation(s): 0 
Gene Names: rps17eMTH803
Find proteins for O26894 (Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H))
Explore O26894 
Go to UniProtKB:  O26894
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 112 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the least restraint violations,target function 
  • OLDERADO: 1RQ6 Olderado

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2004-12-14
    Type: Initial release
  • Version 1.1: 2008-04-29
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance