1RM1

Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.189 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

High Resolution Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex

Jin, X.Gewirth, D.T.Geiger, J.H.

To be published.

Macromolecules

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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
TATA-box binding proteinC [auth A]240Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: SPT15BTF1YER148W
Find proteins for P13393 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Go to UniProtKB:  P13393
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  • Reference Sequence
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Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
Transcription initiation factor IIA small chainD [auth B]122Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: TOA2YKL058W
Find proteins for P32774 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Go to UniProtKB:  P32774
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  • Reference Sequence
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Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
Transcription initiation factor IIA large chainE [auth C]286Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: TOA1YOR194C
Find proteins for P32773 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P32773 
Go to UniProtKB:  P32773
Protein Feature View
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  • Reference Sequence
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 1
    MoleculeChainsLengthOrganismImage
    5'-D(*AP*TP*CP*GP*AP*TP*CP*GP*AP*TP*AP*TP*AP*AP*AP*AP*CP*G)-3'A [auth D]18N/A
    • Find similar nucleic acids by:  Sequence   |   Structure
    • Entity ID: 2
      MoleculeChainsLengthOrganismImage
      5'-D(P*CP*GP*TP*TP*TP*TP*AP*TP*AP*TP*CP*GP*AP*TP*CP*GP*AP*T)-3'B [auth E]18N/A
      Experimental Data & Validation

      Experimental Data

      • Method: X-RAY DIFFRACTION
      • Resolution: 2.50 Å
      • R-Value Free: 0.252 
      • R-Value Work: 0.186 
      • R-Value Observed: 0.189 
      • Space Group: H 3 2
      Unit Cell:
      Length ( Å )Angle ( ˚ )
      a = 173.25α = 90
      b = 173.25β = 90
      c = 164.07γ = 120
      Software Package:
      Software NamePurpose
      DENZOdata reduction
      SCALEPACKdata scaling
      X-PLORmodel building
      CNSrefinement
      X-PLORphasing

      Structure Validation

      View Full Validation Report



      Entry History 

      Deposition Data

      Revision History  (Full details and data files)

      • Version 1.0: 2005-07-26
        Type: Initial release
      • Version 1.1: 2008-04-29
        Changes: Version format compliance
      • Version 1.2: 2011-07-13
        Changes: Version format compliance