Macromolecule Content

Total Structure Weight: 93482.08
Atom Count: 6216
Residue Count: 836
Unique protein chains: 1

1RBY

Human GAR Tfase complex structure with 10-(trifluoroacetyl)-5,10-dideazaacyclic-5,6,7,8-tetrahydrofolic acid and substrate beta-GAR

DOI: 10.2210/pdb1RBY/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli

Deposited: 2003-11-03 Released: 2005-06-14
Deposition Author(s): Zhang, Y., Desharnais, J., Boger, D.L., Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.101 Å
R-Value Free: 0.264
R-Value Work: 0.245

wwPDB Validation3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Human GAR Tfase complex structure

Zhang, Y., Desharnais, J., Boger, D.L., Wilson, I.A.

To be published.

Macromolecules

Find similar proteins by: Sequence | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE	A, B, C, D	209	Homo sapiens	Mutation(s): 0 Gene Names: GART (PGFT, PRGS)
Find proteins for P22102 (Homo sapiens) Go to Gene View: GART Go to UniProtKB: P22102
Protein Feature View Full Protein Feature View for P22102

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions	3D Interactions
KEU Query on KEU Download SDF File Download CCD File	A, B, C, D	N-{4-[(1R)-4-[(2R,4R,5S)-2,4-DIAMINO-6-OXOHEXAHYDROPYRIMIDIN-5-YL]-1-(2,2,2-TRIFLUORO-1,1-DIHYDROXYETHYL)BUTYL]BENZOYL}-D-GLUTAMIC ACID 10-CF3C(OH)2-DDACTHF, HYDROLYZED FORM OF 10-TRIFLUOROACETYL-5,10-DIDEAZA-ACYCLIC-5,6,7,8-TETRAHYDROFOLIC ACID C₂₂ H₃₀ F₃ N₅ O₈ KOLDLUFBEMUZIM-YNPGLMGXSA-N		Ligand Interaction
GAR Query on GAR Download SDF File Download CCD File	A, B	GLYCINAMIDE RIBONUCLEOTIDE C₇ H₁₃ N₂ O₈ P OBQMLSFOUZUIOB-SHUUEZRQSA-L		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.101 Å
R-Value Free: 0.264
R-Value Work: 0.245
Space Group: P 3₁

Unit Cell:

Length (Å)	Angle (°)
a = 126.171	α = 90.00
b = 126.171	β = 90.00
c = 95.389	γ = 120.00

Software Package:

Software Name	Purpose
REFMAC	refinement
SCALEPACK	data scaling
HKL-2000	data collection
HKL-2000	data reduction
AMoRE	phasing

Structure Validation

View Full Validation Report or Ramachandran Plots

Entry History

Deposition Data

Deposited Date: 2003-11-03
Released Date: 2005-06-14
Deposition Author(s): Zhang, Y., Desharnais, J., Boger, D.L., Wilson, I.A.

Revision History

Version 1.0: 2005-06-14
Type: Initial release
Version 1.1: 2008-04-29
Type: Version format compliance
Version 1.2: 2011-07-13
Type: Version format compliance

The RCSB PDB is funded by a grant (DBI-1338415) from the National Science Foundation, the National Institutes of Health, and the US Department of Energy.