1QYP

THERMOCOCCUS CELER RPB9, NMR, 25 STRUCTURES


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Submitted: 25 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

High-resolution structure of an archaeal zinc ribbon defines a general architectural motif in eukaryotic RNA polymerases.

Wang, B.Jones, D.N.Kaine, B.P.Weiss, M.A.

(1998) Structure 6: 555-569


  • PubMed Abstract: 
  • Transcriptional initiation and elongation provide control points in gene expression. Eukaryotic RNA polymerase II subunit 9 (RPB9) regulates start-site selection and elongational arrest. RPB9 contains Cys4 Zn(2+)-binding motifs which are conserved in ...

    Transcriptional initiation and elongation provide control points in gene expression. Eukaryotic RNA polymerase II subunit 9 (RPB9) regulates start-site selection and elongational arrest. RPB9 contains Cys4 Zn(2+)-binding motifs which are conserved in archaea and homologous to those of the general transcription factors TFIIB and TFIIS.


    Related Citations: 
    • Structure of a New Nucleic-Acid-Binding Motif in Eukaryotic Transcriptional Elongation Factor Tfiis
      Qian, X.,Jeon, C.,Yoon, H.,Agarwal, K.,Weiss, M.A.
      (1993) Nature 365: 277
    • Erratum. Structure of a New Nucleic-Acid-Binding Motif in Eukaryotic Transcriptional Elongation Factor Tfiis
      Qian, X.,Jeon, C.,Yoon, H.,Agarwal, K.,Weiss, M.A.
      (1995) Nature 376: 279


    Organizational Affiliation

    Department of Chemistry, Center for Molecular Oncology, University of Chicago, Illinois 60637-5419, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RNA POLYMERASE II
A
57Thermococcus celerGene Names: tfs
Find proteins for Q56254 (Thermococcus celer)
Go to UniProtKB:  Q56254
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Submitted: 25 
  • Olderado: 1QYP Olderado
Software Package:
Software NamePurpose
X-PLORphasing
X-PLORmodel building
VNMRmodel building
VNMRphasing
X-PLORrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1997-12-24
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2017-11-29
    Type: Derived calculations, Other